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| No. of matching species/subspecies etc: 105 | Id | No. of basepairs | 16S rRNA ACC-No | rRNA op. | Updated |
|---|---|---|---|---|---|
| Acinetobacter lwoffii | 141 | 3 184 320 | X81665 | 5 | 2020-11-05 |
| Aeromonas hydrophila subsp. hydrophila | 86 | 4 744 448 | X87271 | 10 | 2021-02-28 |
| Aliivibrio salmonicida | 217 | 4 531 626 | X70643 | 12 | 2021-02-27 |
| Arcobacter butzleri | 111 | 2 341 251 | AY621116 | 5 | 2016-05-04 |
| Arcobacter skirrowii | 250 | L14625 | 2016-05-04 | ||
| Bacillus cereus | 21 | 5 300 915 | AE016877 | 13 | 2022-10-03 |
| Bacillus licheniformis | 12 | 4 222 645 | CP000002 | 7 | 2022-10-03 |
| Bacillus subtilis subsp. subtilis | 133 | 4 214 000 | AB042061 | 10 | 2022-10-03 |
| Bacillus thuringiensis | 187 | 5 237 682 | AF290545 | 14 | 2022-10-03 |
| Bartonella clarridgeiae | 196 | X89208 | 2020-10-28 | ||
| Bartonella henselae | 138 | 1 931 000 | BX897699 | 2 | 2022-09-25 |
| Bordetella avium | 52 | 3 732 255 | AF177666 | 3 | 2017-11-09 |
| Bordetella bronchiseptica | 53 | 5 339 179 | AJ278452 | 3 | 2022-09-22 |
| Borrelia afzelii | 113 | 905 394 | AY342034 | 2 | 2022-09-25 |
| Borrelia anserina | 208 | 904 790 | U42284 | 1 | 2022-09-25 |
| Borrelia burgdorferi | 99 | 910 724 | M59293 | 1 | 2022-10-03 |
| Borrelia coriaceae | 234 | U42286 | 2016-02-10 | ||
| Borrelia garinii | 114 | 904 246 | X85199 | 1 | 2016-02-10 |
| Borrelia theileri | 233 | KF569941 | 2016-02-10 | ||
| Brachyspira aalborgi | 161 | Z22781 | 2020-11-05 | ||
| Brachyspira alvinipulli | 131 | EF455559 | 2022-10-03 | ||
| Brachyspira hyodysenteriae | 97 | 3 036 634 | U14930 | 1 | 2022-10-03 |
| Brachyspira innocens | 232 | NR_044763 | 2021-03-28 | ||
| Brachyspira intermedia | 132 | 3 304 788 | U23033 | 1 | 2020-01-23 |
| Brachyspira pilosicoli | 98 | 2 586 443 | U14927 | 1 | 2022-10-03 |
| Brachyspira suanatina | 140 | DQ473576 | 2020-01-23 | ||
| Burkholderia mallei | 51 | 5 835 527 | AF110187 | 4 | 2021-07-02 |
| Burkholderia pseudomallei | 49 | 7 247 547 | DQ108392 | 4 | 2020-10-28 |
| Campylobacter coli | 109 | 1 860 000 | M59073 | 2022-09-26 | |
| Campylobacter fetus subsp. fetus | 90 | 1 773 615 | DQ174127 | 3 | 2022-01-09 |
| Campylobacter fetus subsp. venerealis | 91 | DQ174131 | 2022-01-09 | ||
| Campylobacter helveticus | 249 | U03022 | 2020-09-27 | ||
| Campylobacter hyointestinalis subsp. hyointestinalis | 247 | AF097689 | 2017-06-14 | ||
| Campylobacter jejuni subsp. jejuni | 89 | 1 641 481 | L14630 | 3 | 2022-09-26 |
| Campylobacter lari | 144 | 1 562 000 | L04316 | 2020-11-05 | |
| Campylobacter upsaliensis | 110 | L14628 | 2022-09-26 | ||
| Capnocytophaga canimorsus | 265 | 2 571 406 | X97246 | 2022-03-07 | |
| Citrobacter freundii | 142 | AJ233408 | 2022-09-21 | ||
| Clostridioides difficile | 26 | 4 290 252 | AB075770 | 11 | 2022-10-02 |
| Clostridium botulinum, group I | 202 | 3 863 450 | L37585 | 8 | 2017-09-17 |
| Clostridium botulinum, group III | 24 | 2 773 157 | L37590 | 10 | 2022-10-02 |
| Clostridium botulinum, group IV | 204 | X68316 | 2017-09-17 | ||
| Clostridium chauvoei | 25 | U51843 | 2022-10-02 | ||
| Clostridium colinum | 259 | X76748 | 2017-06-20 | ||
| Clostridium haemolyticum | 162 | AB037910 | 2020-01-23 | ||
| Clostridium novyi | 27 | 2 547 720 | L37594 | 10 | 2022-08-19 |
| Clostridium piliforme | 28 | L07416 | 2020-05-07 | ||
| Clostridium septicum | 30 | U59278 | 2022-08-01 | ||
| Clostridium tetani | 32 | 2 799 251 | X74770 | 6 | 2021-09-16 |
| Clostridium tyrobutyricum | 262 | 2018-12-14 | |||
| Dichelobacter nodosus | 104 | 1 389 350 | DQ016290 | 3 | 2022-10-02 |
| Edwardsiella tarda | 173 | 3 760 463 | AB050827 | 8 | 2022-04-13 |
| Escherichia coli | 68 | 4 646 332 | X80725 | 7 | 2022-09-21 |
| Flavobacterium columnare | 128 | 3 162 432 | D12659 | 5 | 2016-03-08 |
| Flavobacterium psychrophilum | 129 | 2 861 988 | AF090991 | 6 | 2016-03-08 |
| Helicobacter bilis | 242 | U18766 | 2016-05-12 | ||
| Helicobacter bizzozeronii | 238 | Y09404 | 2016-05-12 | ||
| Helicobacter canis | 239 | AY631945 | 2016-05-12 | ||
| Helicobacter felis | 241 | M57398 | 2016-05-12 | ||
| Helicobacter heilmannii | 243 | HM625820 | 2017-11-09 | ||
| Helicobacter hepaticus | 92 | 1 799 146 | U07575 | 1 | 2016-05-12 |
| Helicobacter mustelae | 245 | M35048 | 2016-05-12 | ||
| Helicobacter pylori | 93 | 1 643 831 | Z25741 | 2 | 2021-07-02 |
| Helicobacter salomonis | 240 | U89351 | 2016-05-12 | ||
| Helicobacter suis | 244 | EF204589 | 2016-05-12 | ||
| Klebsiella mobilis | 224 | AB004750 | 2022-04-06 | ||
| Lawsonia intracellularis | 108 | 1 457 619 | U30147 | 2 | 2022-03-22 |
| Legionella pneumophila subsp. pneumophila | 64 | 3 397 754 | M59157 | 3 | 2020-11-05 |
| Leptospira borgpetersenii | 116 | 3 876 235 | AM050569 | 2 | 2022-10-03 |
| Leptospira interrogans | 101 | 4 627 366 | Z12817 | 2 | 2020-10-28 |
| Leptospira kirschneri | 115 | AY631895 | 2020-10-28 | ||
| Listeria innocua | 186 | 3 011 208 | X98527 | 6 | 2015-11-27 |
| Listeria ivanovii subsp. ivanovii | 168 | 2 928 879 | AJ549930 | 6 | 2020-10-19 |
| Listeria monocytogenes | 13 | 2 944 528 | X56153 | 6 | 2022-09-26 |
| Listonella anguillarum | 85 | X16895 | 2018-09-13 | ||
| Morganella morganii subsp. morganii | 166 | AY043390 | 2022-04-13 | ||
| Mycoplasmoides gallisepticum | 36 | 996 422 | M22441 | 2 | 2022-01-21 |
| Mycoplasmoides pneumoniae | 39 | 816 394 | M29061 | 1 | 2021-12-16 |
| Mycoplasmopsis pulmonis | 40 | 963 879 | AF125582 | 1 | 2022-01-13 |
| Paenibacillus larvae | 179 | 4 046 337 | X60619 | 8 | 2019-10-29 |
| Paeniclostridium sordellii | 31 | AB075771 | 2021-10-07 | ||
| Pantoea agglomerans | 266 | AJ233423 | 2022-04-13 | ||
| Proteus mirabilis | 72 | 4 063 606 | AF008582 | 7 | 2022-09-21 |
| Proteus vulgaris | 73 | DQ885257 | 2022-09-21 | ||
| Pseudomonas aeruginosa | 65 | 6 264 403 | Z76651 | 4 | 2022-09-22 |
| Pseudomonas anguilliseptica | 66 | X99540 | 2018-09-27 | ||
| Rhodococcus hoagii | 10 | 5 043 170 | X80614 | 4 | 2021-12-02 |
| Rickettsia rickettsii | 44 | 1 257 710 | L36217 | 1 | 2020-10-28 |
| Salmonella enterica subsp. enterica | 70 | 4 755 700 | X80681 | 7 | 2022-09-21 |
| Salmonella enterica subsp. arizonae | 157 | 4 600 800 | AF008580 | 7 | 2022-04-06 |
| Salmonella enterica | 211 | 2022-04-06 | |||
| Salmonella spp. | 210 | 2022-04-06 | |||
| Serratia marcescens subsp. marcescens | 74 | AJ233431 | 2022-04-13 | ||
| Shigella flexneri | 76 | 4 599 354 | X96963 | 7 | 2022-04-06 |
| Stenotrophomonas maltophilia | 159 | 4 851 126 | AB008509 | 4 | 2018-09-27 |
| Treponema pallidum subsp. pallidum | 100 | 1 138 011 | M88726 | 2 | 2020-11-05 |
| Treponema paraluiscuniculi | 134 | 1 133 390 | JX120546 | 2 | 2022-10-03 |
| Treponema pedis | 188 | 2 889 325 | EF061268 | 2 | 2022-09-26 |
| Treponema phagedenis | 139 | DQ470655 | 2016-03-18 | ||
| Vibrio alginolyticus | 82 | X56576 | 2020-01-23 | ||
| Vibrio cholerae | 81 | 4 033 465 | X74695 | 8 | 2022-03-25 |
| Vibrio parahaemolyticus | 83 | 5 165 800 | X74720 | 11 | 2020-10-28 |
| Vibrio vulnificus | 84 | 5 211 578 | X74726 | 9 | 2020-10-28 |
| Yersinia enterocolitica subsp. enterocolitica | 77 | 4 615 899 | AF366378 | 7 | 2022-09-21 |
| Yersinia pseudotuberculosis | 79 | 4 744 671 | AF366375 | 7 | 2022-04-13 |
News |
|---|
| New names of taxa within the classification category phylum During October 2021, an article was published by A. Oren och G.M. Garrity, in which new names are proposed for a number of taxa within the classification category phylum. This has resulted in many discussions in social media about whether it was really necessary to make these changes, which have created confusion among microbiologists and other professionals who come into contact with bacteriology. Published 2022-09-28. Read more... |
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Swedish University of Agricultural Sciences - Faculty of Veterinary Medicine and Animal Science